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Density Functional Theory in Practice (DIP)

Vak
2024-2025

Admission requirements

Core course in MSc Chemistry - Energy & Sustainability. Elective course in MSc Chemistry, MSc Physics, MSc Life Science and Technology.

For students with a BSc in MST with a major in chemistry/materials, students with a BSc in Physics or equivalent. Students should have basic knowledge of quantum mechanics (Schrödinger equation, wave functions, H atom, quantum numbers, variational principle) and linear algebra (matrices, eigenvalues and eigenvectors).

Description

Theoretical sections of contemporary scientific articles describing calculations based on density functional theory (DFT), the current workhorse of electronic structure calculations in chemistry, have become a challenge for the reader. Filled by a ‘gibberish’ of abbreviations and computational parameters, it is difficult if not impossible to understand how e.g. binding energies have been obtained. Starting from the essential theory, this course focuses on practical aspects of DFT calculations. This includes exchange correlation potentials, achieving self-consistency, basis sets and pseudopotentials, periodic boundary conditions and k-points as well as the calculation of basic properties like binding energies and equilibrium geometries of simple molecules and solids. New topics are first introduced by a lecture. This is followed by a 'hands-on' computer exercise. After that, the students will present a related paper from recent scientific literature focus on density function theory.

Course objectives

After this course the students are able to

  • describe the ideas behind the foundations of DFT (Hohenberg-Kohn and Kohn-Sham theorems)

  • recognize commonly used exchange-correlation functionals and categorize them

  • explain how the Kohn-Sham equations are discretized on computers when going from atoms to molecules classify concomitant basis sets

  • describe the treatment of core and valence electrons as well as the use of k-points in periodic systems

  • understand and critically examine density functional theory calculations employed in current literature

  • name opportunities and challenges of DFT-based modeling in industrial and academic research

Timetable

Schedule information can be found on the website of the programmes.

In MyTimetable, you can find all course and programme schedules, allowing you to create your personal timetable. Activities for which you have enrolled via MyStudyMap will automatically appear in your timetable.

Additionally, you can easily link MyTimetable to a calendar app on your phone, and schedule changes will be automatically updated in your calendar. You can also choose to receive email notifications about schedule changes. You can enable notifications in Settings after logging in.

Questions? Watch the video, read the instructions, or contact the ISSC helpdesk.

Note: Joint Degree students from Leiden/Delft need to combine information from both the Leiden and Delft MyTimetables to see a complete schedule. This video explains how to do it.

Mode of instruction

Lectures and discussion meetings combined with computer exercises.

Assessment method

  • Reports on computer exercises (50%), written examination (50%).
    A minimum grade of 5.0 is required for both the computer exercise and the written examination.
    If technical issues render the use of computer exercises impossible, the examination mode can be adjusted to a written examination (100%). If this is the case, this will be clearly communicated.

A schedule for the hand-in dates/times for the computer exercises will be posted on Brightspace. Computer exercises can not be retaken. Late hand-ins will not be considered. A single retake covering all of the material of the course will be possible (100%).

Reading list

  • Kieron Burke and friends, The ABC of DFT, 2007, Chapters 1-10, The ABC of DFT

  • C.Fiolhais, F.Nogueira M.Marques (Eds), A Primer in Density Functional Theory, Springer 2013, Chapter 6: “A Tutorial on Density Functional Theory”, A Tutorial on Density Functional Theory

  • Koch and Holthausen, A Chemist's Guide to Density Functional Theory, Wiley 2001; chapters 4-6 (book available in the library)

In addition, ~10 DFT-related articles from (recent) primary literature are used.

Registration

As a student, you are responsible for enrolling on time through MyStudyMap.

In this short video, you can see step-by-step how to enrol for courses in MyStudyMap.
Extensive information about the operation of MyStudyMap can be found here.

There are two enrolment periods per year:

  • Enrolment for the fall opens in July

  • Enrolment for the spring opens in December

See this page for more information about deadlines and enrolling for courses and exams.

Note:

  • It is mandatory to enrol for all activities of a course that you are going to follow.

  • Your enrolment is only complete when you submit your course planning in the ‘Ready for enrolment’ tab by clicking ‘Send’.

  • Not being enrolled for an exam/resit means that you are not allowed to participate in the exam/resit.

Contact

Dr. Jörg Meyer, Dr. Katharina Doblhoff-Dier

Remarks

Students need to make use of their own computers for the computer exercises (Windows or MacOS).

Assignment deadlines are communicated via Brightspace.

According to OER article 4.8, students are entitled to view their marked examination for a period of 30 days following the publication of the results of a written examination. Students should contact the lecturer to make an appointment for such an inspection session.

Software
Starting from the 2024/2025 academic year, the Faculty of Science will use the software distribution platform Academic Software. Through this platform, you can access the software needed for specific courses in your studies. For some software, your laptop must meet certain system requirements, which will be specified with the software. It is important to install the software before the start of the course. More information about the laptop requirements can be found on the student website.