This course presents the common basic theory and methods for phylogenetic analysis. Topics treated include basic concepts, homology, homoplasy, parsimony, character coding, phylogenetic algorithms, tree evaluation and branch supports, applied to morphological and molecular data. Computer programs will be demonstrated and used by the participants to practice various topics
Coordinator
Dr.P.H.Hovenkamp, email: hovenkamp@nhn.leidenuniv.nl
Methods of instruction
Lectures, computer use, literature study.
Study material
Syllabus, manuals
Examination
no
Course requirements/recommendations
This course is the English language version of a block in the former 2nd year Biology course Biodiversiteit en patroonanalyse. It can be given whenever there are foreign MSc students who need a basic introduction into phylogenetic analysis.
Time table
One week; the course will be held whenever there is sufficient interest from English speaking students
Application
Dr. P. H. Hovenkamp, Nationaal Herbarium Nederland, PO Box 9514, 2300 RA Leiden, e-mail: hovenkamp@nhn.leidenuniv.nl
Blackboard
The course has its own website.
Course objective
On completion, students should be familiar with basic concepts in the field of phylogenetic analysis, such as cladograms, consensus trees, support measures.
Remarks
x